发表论文--遗传发育所左建儒课题组

主页 > 科研成果 > 发表论文

发表论文授权专利

1. Jing H. *, Yang X., Ryan J. E., Feng J., Zhang J., Marcelo Rodrigues Alves de F. , Patarasuda Chaisupa,R. Clay W., Alex S. H., Lucia C. S., Zuo J. *(2023) Nitric oxide-mediated S-nitrosylation of IAA17 protein in intrinsically disordered region represses auxin signaling. Journal of Genetics and Genomics 50:473-485. new

2. Ma, X.#, Nian, J.#, Yu, H.#, Zhang, F., Feng, T., Kou, L., Zhang, J., Wang, D., Li, H., Chen, L., Dong, G., Xie, X., Wang, G., Qian, Q., Li, J.*, and Zuo, J.* (2023) Link glucose signaling to nitrogen utilization by the OsHXK7-ARE4 complex in rice. Developmental Cell

3. Chen, L. *, Sun S., Song C., Zhou J., Li J., Zuo J. * (2022) Nitric oxide negatively regulates gibberellin signaling to coordinate growth and salt tolerance in Arabidopsis. Journal of Genetics and Genomics 49:756-765.

4. 龚心如#, 詹妮, 胡济梁, 左建儒, 陈立超* (2022)植物一氧化氮合成代谢与信号转导研究进展与展望。中国科学:生命科学 53（3）: 322 -333.

5. Wang, Q., Su, Q., Nian, J., Zhang, J., Guo, M., Dong, G., Hu, J., Wang, R., Wei, C., Li, G., Wang, W., Guo, H.-S., Lin, S., Qian, W., Xie, X., Qian, Q., Chen, F.*, and Zuo, J.* (2021) The Ghd7 transcription factor represses ARE1 expression to enhance nitrogen utilization and grain yield in rice. Mol Plant 14: 1012–1023

6. Guo, M.#, Wang, Q.#, Zong, Y.#, Nian, J., Li, H., Li, J., Wang, T., Gao, C.*, and Zuo, J.* (2021) Genetic manipulations of TaARE1 boost nitrogen utilization and grain yield in wheat. J Genet Genomics 2021, 48: 950–953

7. Chen L., Wu R., Feng J., Feng T., Wang C., Hu J., Zhan N., Li Y., Ma X., Ren B., Zhang J., Song C., Li J., Zhou J., and Zuo J.* (2020) Transnitrosylation Mediated by the Non-canonical Catalase ROG1 Regulates Nitric Oxide Signaling in Plants. Developmental Cell 53:1–14

8. 陈立超#, 詹妮#, 李彦莎, 冯健, 左建儒*.(2019) 植物蛋白质S-亚硝基化修饰的检测与分析.植物学报. 54 : 497–502.

9. Feng J., Chen L., and Zuo J.* (2019) Protein S-nitrosylation in plants: Current progresses and challenges. J Integr Plant Biol, 61: 1206-1223

10. Zhan N.#, Wang C.#, Chen L., Yang H., Feng J., Gong X., Ren B., Wu R., Mu J., Li Y., Liu Z., Zhou Y., Peng J., Wang K., Huang X., Xiao S., and Zuo J.* (2018) S-Nitrosylation targets GSNO reductase for selective autophage during hypoxia responses in plants. Mol Cell, 71: 142-154

11. Wang Q.*, Nian J.*, Xie X.*, Yu H., Zhang J., Bai J., Dong G., Hu J., Bai B., Chen L., Xie Q., Feng J., Yang X., Peng J., Chen F., Qian Q., Li J., and Zuo J. (2018) Genetic variations in ARE1 mediate grain yield by modulating nitrogen utilization in rice. Nat Commun, 9:735. (* These authors contributed equally)

12. Hu, J.,* Yang, H.,* Mu, J., Lu, T., Peng, J., Deng, X., Kong, Z., Bao, S., Cao, X., and Zuo, J. (2017) Nitric oxide regulates protein methylation during stress responses in plants. Mol Cell, 67: 702-710.

13. Zhao, W., Guan, C., Feng, J., Liang, Y., Zhan, N., Zuo, J., and Ren, B. (2016) The Arabidopsis CROWDED NUCLEI genes regulate seed germination by modulating degradation of ABI5 protein. J Integr Plant Biol, 58: 669-678.

14. Yang, X.,* Nian, J.,* Xie, Q., Feng, J., Zhang, F., Jing, H., Zhang, J., Dong, G., Liang, Y., Peng, J., Wang, G., Qian, Q., and Zuo, J. (2016) Rice ferredoxin-dependent glutamate synthase regulates nitrogen-carbon metabolomes and is genetically differentiated between japonica and indica subspecies. Mol. Plant, 9: 1520-1534 (* These authors contributed equally)

15. Xie, Q., Liang, Y., Zhang, J., Zheng, H., Dong, G., Qian, Q., Zuo, J. (2016). Involvement of a putative bipartite transit peptide in targeting rice pheophorbide a oxygenase into chloroplasts for chlorophyll degradation during leaf senescence. J Genet Genomics, 43: 145-154

16. Bai, J.*, Zhu, X.*, Wang, Q.*, Zhang, J., Chen, H., Dong, G., Zhu, L., Zheng, H., Xie, Q., Nian, J., Chen, F., Fu, Y., Qian, Q., Zuo, J. (2015) Rice TUTOU1 encodes a SCAR-like protein that is important for actin organization and panicle development. Plant Physiol, 169: 1179-1191. (* These authors contributed equally)

17. Jing, H.*, Yang, X.*, Zhang, J., Liu, X., Zheng, H., Dong, G., Nian, J., Feng, F., Xia, B., Qian, Q., Li, J., and Zuo, J. (2015) Peptidyl-prolyl isomerization targets rice Aux/IAAs for degradation during auxin signaling. Nat Commun, 6:7395. (* These authors contributed equally)

18. NATURE PLANTS / News and Views

19. Yang, H.*, Mu, J.*, Chen, L., Feng, J. Hu, J., Li, L.,Zhou, J.-M., and Zuo, J (2015). S-nitrosylation positively regulates ascorbate peroxidase activity during plant stress responses. Plant Physiol, 167: 1604-1615. (* These authors contributed equally)

20. PLANT PHYSIOLOGY Commentary

21. Hu, J., Huang, X., Chen, L., Sun, X., Lu, C., Zhang, L., Wang, Y., and Zuo, J. (2015) Site-specific nitrosoproteomic identification of endogenously S-nitrosylated proteins in Arabidopsis. Plant Physiol. 167: 1731-1746.

22. Zuo, J., and Li, J. (2014) Molecular genetic dissection of quantitative trait loci regulating rice grain size. Annu. Rev. Genet. 48: 99-118.

23. Guan, C., Wang, X., Feng, J., Hong, S., Liang, Y., Ren, B., and Zuo, J. (2014) Cytokinin antagonizes abscisic acid-mediated inhibition of cotyledon greening by promoting the degradation of ABI5 protein in Arabidopsis. Plant Physiol. 164: 1515-1526.

24. Zuo, J., and Li, J. (2013) Molecular Dissection of Complex Agronomic Traits of Rice: A Team Effort by Chinese Scientists in Recent Years. Nat Sci Rev. 1: 253-276.

25. Ren, B.*, Chen, Q.*, Hong, S., Zhao, W., Feng, J., Feng, H., and Zuo, J. (2013) The Arabidopsis eukaryotic translation initiation factor eIF5A-2 regulates root protoxylem development by modulating cytokinin signaling. Plant Cell. 25: 3841-3857. (* These authors contributed equally)

26. Li, Y., Chen, L., Mu, J. and Zuo, J. (2013) LESION SIMULATING DISEASE1 interacts with catalases to regulate hypersensitive cell death in Arabidopsis. Plant Physiol. 163: 1059-1070

27. Zheng, H., Li, S., Ren, B., Zhang, J., Ichii, M., Taketa, S., Tao, Y., Zuo, J., and Wang, H. (2013) LATERAL ROOTLESS2, a cyclophilin protein, regulates lateral root initiation and auxin signaling pathway in rice. Mol Plant. 6: 1719-1721.

28. Li, J.*, Mu, J.*, Bai, J.*, Fu, F., Zou, T., An, F., Zhang, J., Jing, H., Wang, Q., Li, Z., Yang, S., and Zuo, J. (2013) PARAQUAT RESISTANT 1, a Golgi-localized putative transporter protein, is involved in intracellular transport of paraquat. Plant Physiol. 162: 470-483. (* These authors contributed equally)

29. Feng, J., Wang, C., Chen, Q., Chen, H., Ren, B., Li, X., and Zuo, J. (2013) S-nitrosylation of phosphotransfer proteins represses cytokinin signaling. Nat Commun. 4: 1529.

30. Mu, J., Tan, H., Hong, S., Liang, Y., and Zuo, J. (2013) Arabidopsis transcription factor genes NF-YA1, 5, 6 and 9 play redundant roles in male gametogenesis, embryogenesis and seed development. Mol Plant. 6: 188-201.

31. Tan, H., Yang, X., Zhang, F., Zheng, X., Qu, C., Mu, J., Fu, F., Li, J., Guan, R., Zhang, H., Wang, G., and Zuo, J. (2011). Enhanced seed oil production in canola by conditional expression of Brassica napus LEAFY COTYLEDON1 and LEC1-LIKE in developing seeds. Plant Physiol. 156: 1577-1588.

32. Deng, Y.*, Dong, H.*, Mu, J., Ren, B., Zheng, B., Ji, Z., Yang, W.-C., Liang, Y., Zuo, J. (2010) Arabidopsis histidine kinase CKI1 acts upstream of HISTIDINE PHOSPHOTRANSFER PROTEINS to regulate female gametophyte development and vegetative growth. Plant Cell. 22: 1232–1248. (* These authors contributed equally)

33. Wang, X., Xue, L., Sun, J., Zuo. J. (2010) The Arabidopsis BE1 gene, encoding a putative glycoside hydrolase localized in plastids, plays crucial roles during embryogenesis and carbohydrate metabolism. J Integr Plant Biol. 52: 273–288.

34. Chen, R., Sun, S., Wang, C., Li, Y., Liang, Y., An, F., Li, C., Dong, H., Yang, X., Zhang, J., and Zuo, J. (2009) The Arabidopsis PARAQUAT RESISTANT2 gene encodes an S-nitrosoglutathione reductase that is a key regulator of cell death. Cell Res. 19: 1377-1387.

35. Ren, B., Liang, Y., Deng, Y., Chen, Q., Zhang, J., Yang, X., and Zuo, J. (2009) Genome-wide comparative analysis of type-A Arabidopsis response regulator genes by overexpression studies reveals their diverse roles and regulatory mechanisms in cytokinin signaling. Cell Res. 19: 1178-1190.

36. Wang, X.*, Niu, Q-W.*, Teng, C., Li, C., Mu, J., Chua, N.-H., and Zuo, J. (2009) Overexpression of PGA37/MYB118 and MYB115 promotes vegetative-to-embryonic transition in Arabidopsis. Cell Res. 19: 224-235. (* These authors contributed equally)

37. Teng, C.*, Dong, H.*, Shi, L.*, Deng, Y., Mu, J., Zhang, J., Yang, X., and Zuo, J. (2008) Serine palmitoyltransferase, a key enzyme for de novo synthesis of sphingolipids, is essential for male gametophyte development in Arabidopsis. Plant Physiol. 146: 1322-1332. (* These authors contributed equally)

38. Mu, J., Tan, H., Zheng, Q., Fu, F., Liang, Y., Zhang, J., Yang, X., Wang, T., Chong, K., Wang, X., and Zuo, J. (2008) LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana. Plant Physiol. 148: 1042-1054.

39. Shi, L.*, Bielawski, J.*, Mu, J.* , Dong, H., Teng, C., Zhang, J., Yang, X., Tomishige, N., Hanada, K., Hannun, Y.A., and Zuo, J. et al. (2007). Involvement of sphingoid bases in mediating reactive oxygen intermediate production and programmed cell death in Arabidopsis. Cell Res. 17: 1030-1040. (* These authors contributed equally)

40. Feng, H., Chen, Q., Feng, J., Zhang, J, Yang, X., and Zuo, J (2007) Functional characterization of the Arabidopsis eukaryotic translation initiation factor 5A-2 (eIF-5A-2) that plays a crucial role in plant growth and development by regulating cell division, cell growth and cell death. Plant Physiol. 144: 1531-1545.

41. Dong, H.*, Deng, Y.*, Mu, J., Lu, Q., Wang, Y., Xu, Y., Chu, C., Chong, K., Lu, C., and Zuo, J. (2007) The Arabidopsis Spontaneous Cell Death1 gene, encoding a z-carotene desaturase essential for carotenoid biosynthesis, is involved in chloroplast development, photoprotection and retrograde signaling. Cell Res. 17: 458-470. (* These authors contributed equally)

42. Zheng, B.*, Deng, Y.*, Mu, J., Ji, Z., Xiang, T., Niu, Q.-W., Chua, N.-H., Zuo, J. (2006) Cytokinin affects circadian-clock oscillation in a phytochrome B- and Arabidopsis Response Regulator4-dependent manner. Physiol. Plant. 127: 277–292. (* These authors contributed equally)

43. Zuo, J., Hare, P.D., and Chua, N.H. (2006) Applications of chemical-inducible expression systems in functional genomics and biotechnology. In “Methods in Molecular Biology-Arabidopsis Protocols”, eds. Salinas, J., and Sanchez-Serrano, J.J., pp 329-342. Humana Press, NJ.

44. Sun, J., Hirose, N., Wang, X., Wen, P., Xue, L., Sakakibara, H., and Zuo, J. (2005) The Arabidopsis SOI33/AtENT8 gene encodes a putative equilibrative nucleoside transporter that is involved in cytokinin transport in planta. J Integrat Plant Biol. 47: 588-603.

45. Sun, J.*, Niu, Q.-W.*, Tarkowski, P., Zheng, B., Tarkowska, D., Sandberg, G., Chua, N.-H., and Zuo, J. (2003) The Arabidopsis AtIPT8/PGA22 gene encodes an isopentenyl transferase that is involved in de novo cytokinin biosynthesis. Plant Physiol. 131:167-176. (* These authors contributed equally)

46. Zuo, J., Niu, Q., Ikeda, Y., and Chua, N.-H. (2002) Marker-free transformation: Increasing transformation frequency by the use of regeneration-promoting genes. Curr Opin Biotechnol. 13: 173-180.

47. 邓岩* 王兴春* 杨淑华左建儒（2006）细胞分裂素: 代谢、信号转导、交叉反应与农艺性状改良. 植物学通报, 23: 478-498. (* 同等贡献)

48. 张健* 徐金相* 孔英珍* 纪振动* 王兴春* 安丰英* 李超* 孙加强张素芝杨晓辉牟金叶刘新仿李家洋薛勇彪左建儒 (2005) 化学诱导激活型拟南芥突变体库的构建及分析. 遗传学报 32: 1082-1088. (* 同等贡献)

49. 郑丙莲张素芝孙加强邓岩左建儒（2003）细胞分裂素信号转导：已知的简单性与未知的复杂性. 科学通报 48: 885-891.

50. Zuo, J., Niu, Q., Moller, S., and Chua, N.-H. (2001) Chemical-regulated, site-specific DNA recombination in transgenic plants. Nat Biotechnol. 19: 157-161.

51. Zuo, J., Niu, Q., Frugis, G., and Chua, N.-H. (2002) The WUSCHEL gene promotes vegetative-to-embryonic transition in Arabidopsis. Plant J. 30:349-359 (cover story).